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Task 11913444

Task 11913444

Name hadsm3dhet2_u3ec_006725919_11
Workunit 6929262
Created 20 Sep 2010, 20:34:21 UTC
Sent 20 Sep 2010, 20:42:05 UTC
Report deadline 3 Sep 2011, 2:02:05 UTC
Received 4 Nov 2010, 17:12:31 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 22 (0x00000016) Unknown error code
Computer ID 844607
Run time 9 days 8 hours 17 min 49 sec
CPU time 8 days 22 hours 19 min 19 sec
Validate state Invalid
Credit 5,160.66
Device peak FLOPS 3.11 GFLOPS
Application version UK Met Office HadSM3 Slab Model v6.09
i686-apple-darwin
Stderr
<core_client_version>6.10.17</core_client_version>
<![CDATA[
<message>
process exited with code 22 (0x16, -234)
</message>
<stderr_txt>
b3    5  0x0134d44f    6  0x002eeac6    7  0x003f55ea    8  0x00452abd    9  0x004698c0   10  0x000026b6   11  0x000025dd  
Thread 0 crashed with X86 Thread State (32-bit):
  eax: 0xffffffe1 ebx: 0x00000003 ecx: 0xbfffc3ec edx: 0x9924d0fa
  edi: 0x00000000 esi: 0x00000000 ebp: 0xbfffc428 esp: 0xbfffc3ec
   ss: 0x0000001f efl: 0x00000206 eip: 0x9924d0fa  cs: 0x00000007
   ds: 0x0000001f  es: 0x0000001f  fs: 0x00000000  gs: 0x00000037

Binary Images Description:
    0x1000 -   0x517fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_um_6.11_i686-apple-darwin
 0x12a9000 -  0x12c4fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_v2sv_1999_200_006689397/lib/libsvml.dylib
 0x131c000 -  0x13b3fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_v2sv_1999_200_006689397/lib/libifcoremt.dylib
 0x13fc000 -  0x1556fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_v2sv_1999_200_006689397/lib/libimf.dylib
 0x1669000 -  0x1697fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_v2sv_1999_200_006689397/lib/libirc.dylib
0x96096000 - 0x960a4fff /usr/lib/libz.1.dylib
0x9924c000 - 0x993f2fff /usr/lib/libSystem.B.dylib
0x997c0000 - 0x997c3fff /usr/lib/system/libmathCommon.A.dylib


Exiting...
Controller:: CPDN process is not running, exiting, bRetVal = 1, checkPID=0, selfPID=32182, iMonCtr=1
Model crash detected, will try to restart...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
SIGSEGV: segmentation violation

Crashed executable name: famous_um_6.11_i686-apple-darwin
built using BOINC library version 6.11.1
Machine type Intel 80486 (32-bit executable)
System version: Macintosh OS 10.6.4 build 10F569
Thu Sep 23 01:17:14 2010

sh: /usr/bin/atos: No such file or directory
  0  0x0048fdcf    1  0x0049054a    2  0x992b31fb    3  0xffffffff    4  0x0134e6b3    5  0x0134d44f    6  0x002eeac6    7  0x003f55ea    8  0x00452abd    9  0x004698c0   10  0x000026b6   11  0x000025dd  
Thread 0 crashed with X86 Thread State (32-bit):
  eax: 0xffffffe1 ebx: 0x00000003 ecx: 0xbfffc3ec edx: 0x9924d0fa
  edi: 0x00000000 esi: 0x00000000 ebp: 0xbfffc428 esp: 0xbfffc3ec
   ss: 0x0000001f efl: 0x00000206 eip: 0x9924d0fa  cs: 0x00000007
   ds: 0x0000001f  es: 0x0000001f  fs: 0x00000000  gs: 0x00000037

Binary Images Description:
    0x1000 -   0x517fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_um_6.11_i686-apple-darwin
 0x12a9000 -  0x12c4fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_v2sv_1999_200_006689397/lib/libsvml.dylib
 0x131c000 -  0x13b3fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_v2sv_1999_200_006689397/lib/libifcoremt.dylib
 0x13fc000 -  0x1556fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_v2sv_1999_200_006689397/lib/libimf.dylib
 0x1669000 -  0x1697fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_v2sv_1999_200_006689397/lib/libirc.dylib
0x96096000 - 0x960a4fff /usr/lib/libz.1.dylib
0x9924c000 - 0x993f2fff /usr/lib/libSystem.B.dylib
0x997c0000 - 0x997c3fff /usr/lib/system/libmathCommon.A.dylib


Exiting...
Controller:: CPDN process is not running, exiting, bRetVal = 1, checkPID=0, selfPID=1104, iMonCtr=1
Model crash detected, will try to restart...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...

BUFFIN: Read Failed: No such file or directory
BUFFIN: C I/O Error feof - Unit 60 - Return code = 1

BUFFIN: Read Failed: No such file or directory
BUFFIN: C I/O Error feof - Unit 61 - Return code = 1

BUFFIN: Read Failed: No such file or directory
BUFFIN: C I/O Error feof - Unit 68 - Return code = 1

BUFFIN: Read Failed: No such file or directory
BUFFIN: C I/O Error feof - Unit 69 - Return code = 1
 (3146): called boinc_finish
[2010- 9-23  7:34:46:] :: BOINC:: Initializing ... ok.
[2010- 9-23  7:34:46:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00001
Starting work on structure: _00002
Starting work on structure: _00003
Starting work on structure: _00004
Starting work on structure: _00005
Starting work on structure: _00006
Starting work on structure: _00007
Starting work on structure: _00008
Starting work on structure: _00009
Starting work on structure: _00010
Starting work on structure: _00011
Starting work on structure: _00012
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-24  0:51:29:] :: BOINC:: Initializing ... ok.
[2010- 9-24  0:51:29:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00012
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_7 ... success! 
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-24  5:12: 6:] :: BOINC:: Initializing ... ok.
[2010- 9-24  5:12: 6:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00012
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_7 ... success! 
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-24  5:18:24:] :: BOINC:: Initializing ... ok.
[2010- 9-24  5:18:24:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00012
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage4_kk_1 ... success! 
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-24 10: 7: 0:] :: BOINC:: Initializing ... ok.
[2010- 9-24 10: 7: 0:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00012
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000012_ClassicAbinitio__stage4_kk_1 ... success! 
Starting work on structure: _00013
[2010- 9-24 10:19:25:] :: BOINC:: Initializing ... ok.
[2010- 9-24 10:19:25:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00013
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_3 ... success! 
======================================================
DONE ::     1 starting structures  10533.7 cpu seconds
This process generated     13 decoys from      13 attempts
======================================================

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
called boinc_finish
[2010- 9-24 10:31:39:] :: BOINC:: Initializing ... ok.
[2010- 9-24 10:31:39:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00001
Starting work on structure: _00002
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-25  0:26:50:] :: BOINC:: Initializing ... ok.
[2010- 9-25  0:26:50:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00002
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_7 ... success! 
[2010- 9-25  0:37:10:] :: BOINC:: Initializing ... ok.
[2010- 9-25  0:37:10:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00002
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000002_ClassicAbinitio__stage_3_iter1_10 ... success! 
Starting work on structure: _00003
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-25  1:35: 2:] :: BOINC:: Initializing ... ok.
[2010- 9-25  1:35: 2:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00003
Starting work on structure: _00004
Starting work on structure: _00005
Starting work on structure: _00006
Starting work on structure: _00007
Starting work on structure: _00008
Starting work on structure: _00009
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-25  3:32:35:] :: BOINC:: Initializing ... ok.
[2010- 9-25  3:32:35:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00009
Starting work on structure: _00010
Starting work on structure: _00011
Starting work on structure: _00012
======================================================
DONE ::     1 starting structures  10120.5 cpu seconds
This process generated     12 decoys from      12 attempts
======================================================

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
called boinc_finish
[2010- 9-25  4:34:24:] :: BOINC:: Initializing ... ok.
[2010- 9-25  4:34:24:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00001
Starting work on structure: _00002
Starting work on structure: _00003
Starting work on structure: _00004
Starting work on structure: _00005
Starting work on structure: _00006
Starting work on structure: _00007
Starting work on structure: _00008
Starting work on structure: _00009
Starting work on structure: _00010
Starting work on structure: _00011
Starting work on structure: _00012
Starting work on structure: _00013
======================================================
DONE ::     1 starting structures  10201.9 cpu seconds
This process generated     13 decoys from      13 attempts
======================================================

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
called boinc_finish
[2010- 9-25  7:28: 7:] :: BOINC:: Initializing ... ok.
[2010- 9-25  7:28: 7:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00001
Starting work on structure: _00002
Starting work on structure: _00003
Starting work on structure: _00004
Starting work on structure: _00005
Starting work on structure: _00006
Starting work on structure: _00007
Starting work on structure: _00008
Starting work on structure: _00009
Starting work on structure: _00010
Starting work on structure: _00011
Starting work on structure: _00012
Starting work on structure: _00013
======================================================
DONE ::     1 starting structures  10464.9 cpu seconds
This process generated     13 decoys from      13 attempts
======================================================

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
called boinc_finish
[2010- 9-25 10:22:47:] :: BOINC:: Initializing ... ok.
[2010- 9-25 10:22:47:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00001
Starting work on structure: _00002
Starting work on structure: _00003
Starting work on structure: _00004
Starting work on structure: _00005
Starting work on structure: _00006
Starting work on structure: _00007
Starting work on structure: _00008
Starting work on structure: _00009
Starting work on structure: _00010
Starting work on structure: _00011
Starting work on structure: _00012
Starting work on structure: _00013
Starting work on structure: _00014
Starting work on structure: _00015
Starting work on structure: _00016
Starting work on structure: _00017
Starting work on structure: _00018
Starting work on structure: _00019
Starting work on structure: _00020
Starting work on structure: _00021
Starting work on structure: _00022
Starting work on structure: _00023
Starting work on structure: _00024
Starting work on structure: _00025
Starting work on structure: _00026
Starting work on structure: _00027
Starting work on structure: _00028
Starting work on structure: _00029
Starting work on structure: _00030
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-25 15:35:15:] :: BOINC:: Initializing ... ok.
[2010- 9-25 15:35:15:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00030
Continuing computation from checkpoint: chk_S_00000030_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000030_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000030_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000030_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000030_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000030_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000030_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000030_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000030_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000030_ClassicAbinitio__stage_3_iter1_8 ... success! 
Starting work on structure: _00031
Starting work on structure: _00032
Starting work on structure: _00033
Starting work on structure: _00034
Starting work on structure: _00035
Starting work on structure: _00036
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-25 16: 5:35:] :: BOINC:: Initializing ... ok.
[2010- 9-25 16: 5:35:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00036
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000036_ClassicAbinitio__stage4_kk_3 ... success! 
Starting work on structure: _00037
Starting work on structure: _00038
Starting work on structure: _00039
======================================================
DONE ::     1 starting structures  10621.9 cpu seconds
This process generated     39 decoys from      39 attempts
======================================================

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
called boinc_finish
[2010- 9-25 16:19:21:] :: BOINC:: Initializing ... ok.
[2010- 9-25 16:19:21:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00001
Starting work on structure: _00002
Starting work on structure: _00003
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-25 16:58:11:] :: BOINC:: Initializing ... ok.
[2010- 9-25 16:58:11:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00003
Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_7 ... success! 
Starting work on structure: _00004
Starting work on structure: _00005
Starting work on structure: _00006
Starting work on structure: _00007
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-25 18:44:24:] :: BOINC:: Initializing ... ok.
[2010- 9-25 18:44:24:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00007
Continuing computation from checkpoint: chk_S_00000007_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000007_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000007_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000007_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000007_ClassicAbinitio__stage_3_iter1_3 ... success! 
Starting work on structure: _00008
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-25 19:35:52:] :: BOINC:: Initializing ... ok.
[2010- 9-25 19:35:52:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00008
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_3 ... success! 
FILE_LOCK::unlock(): close failed.: Bad file descriptor
[2010- 9-25 19:49:20:] :: BOINC:: Initializing ... ok.
[2010- 9-25 19:49:20:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
[2010- 9-25 19:59:25:] :: BOINC:: Initializing ... ok.
[2010- 9-25 19:59:25:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00008
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000008_ClassicAbinitio__stage4_kk_3 ... success! 
Continuing computation from checkpoint: chk_S_00000008_FastRelax__chk1_fa ... success! 
Continuing computation from checkpoint: chk_S_00000008_FastRelax__chk2_fa ... success! 
Continuing computation from checkpoint: chk_S_00000008_FastRelax__chk3_fa ... success! 
Continuing computation from checkpoint: chk_S_00000008_FastRelax__chk4_fa ... success! 
Starting work on structure: _00009
Starting work on structure: _00010
Starting work on structure: _00011
Starting work on structure: _00012
======================================================
DONE ::     1 starting structures    10458 cpu seconds
This process generated     12 decoys from      12 attempts
======================================================

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
called boinc_finish
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
CPDN Monitor - Quit request from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
MainError:	03:17:36 PM	No files match the supplied pattern.
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
MainError:	03:23:57 PM	No files match the supplied pattern.
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - No 'heartbeat' from BOINC...
No heartbeat from core client for 30 sec - exiting
No heartbeat from core client for 30 sec - exiting
CPDN Monitor - Quit request from BOINC...
CPDN Monitor - Quit request from BOINC...

Model crashed: 

Model crashed: 

Model crashed: 

Model crashed: 

Model crashed: 

Model crashed: 
Sorry, too many model crashes! :-(
called boinc_finish

</stderr_txt>
]]>
Latest Trickles Received
Time Sent (UTC) Host ID Result ID Result Name Timestep CPU Time (sec) Average (sec/TS)
04 Nov 2010 04:44:32 844607 11913444 hadsm3dhet2_u3ec_006725919_11 43,208 764,455 1.3610
04 Nov 2010 04:44:32 844607 11913444 hadsm3dhet2_u3ec_006725919_11 32,406 755,179 1.3708
01 Nov 2010 23:29:32 844607 11913444 hadsm3dhet2_u3ec_006725919_11 21,604 745,688 1.3806
01 Nov 2010 19:02:58 844607 11913444 hadsm3dhet2_u3ec_006725919_11 10,802 735,168 1.3889
01 Nov 2010 15:24:53 844607 11913444 hadsm3dhet2_u3ec_006725919_11 259,248 724,743 1.3978
01 Nov 2010 06:31:36 844607 11913444 hadsm3dhet2_u3ec_006725919_11 248,446 715,620 1.4095
01 Nov 2010 04:24:15 844607 11913444 hadsm3dhet2_u3ec_006725919_11 237,644 705,368 1.4196
31 Oct 2010 21:32:59 844607 11913444 hadsm3dhet2_u3ec_006725919_11 226,842 695,450 1.4307
31 Oct 2010 16:23:34 844607 11913444 hadsm3dhet2_u3ec_006725919_11 216,040 685,201 1.4417
30 Oct 2010 23:51:27 844607 11913444 hadsm3dhet2_u3ec_006725919_11 205,238 675,774 1.4549
30 Oct 2010 12:21:35 844607 11913444 hadsm3dhet2_u3ec_006725919_11 194,436 665,705 1.4673
28 Oct 2010 23:47:01 844607 11913444 hadsm3dhet2_u3ec_006725919_11 183,634 656,249 1.4818
28 Oct 2010 18:44:11 844607 11913444 hadsm3dhet2_u3ec_006725919_11 172,832 646,671 1.4966
28 Oct 2010 14:22:38 844607 11913444 hadsm3dhet2_u3ec_006725919_11 162,030 637,185 1.5125
28 Oct 2010 11:49:09 844607 11913444 hadsm3dhet2_u3ec_006725919_11 151,228 628,270 1.5306
28 Oct 2010 09:20:16 844607 11913444 hadsm3dhet2_u3ec_006725919_11 140,426 619,482 1.5500
28 Oct 2010 03:40:20 844607 11913444 hadsm3dhet2_u3ec_006725919_11 129,624 609,266 1.5668
27 Oct 2010 23:20:39 844607 11913444 hadsm3dhet2_u3ec_006725919_11 118,822 600,179 1.5875
27 Oct 2010 20:31:49 844607 11913444 hadsm3dhet2_u3ec_006725919_11 108,020 590,436 1.6076
27 Oct 2010 17:45:11 844607 11913444 hadsm3dhet2_u3ec_006725919_11 97,218 580,655 1.6289


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